Abstract: Civil-military integration national strategy makes new requests for patent operation, that means the common operation mode for civil use cannot completely apply to the area of military directly. Therefore, this essay proposes an patent operations conception of taking the particularity of military patent system and the characteristic of civil-military integration into consideration at the same time. The patent operation under civil-military integration national strategy includes the key links such as patent layout, bidirectional transformation, value evaluation and technology standardization in the area of civil-military integration, some of these links are already mature while some still exist defects; the solutions are improving the ownership system of military patents, optimizing the developing environment of dual-use technology, strengthening the construction of service platforms and the value evaluation index system, appealing for the participation of all the interested parties as well.