Abstract: Creating a good innovation environment is of great significance for improving the innovation ability of scientific research institutions.At present, due to the lack of openness and cooperation, prominent administrative management characteristics, inadequate classified management and other practical constraints of the innovation environment, most scientific research institutions have formed unreasonable constraints that restrict the innovation vitality of scientific researchers, such as weak basic discipline construction, imperfect resource allocation, difficult transformation of scientific research output, and lagging performance evaluation,It is difficult to effectively improve the innovation capability of scientific research institutions.Therefore, it is urgent to promote the governance of innovation environment of scientific research institutions and create a good innovation environment to break through the bottleneck of development.This paper is based on the practical needs of innovation environment governance of scientific research institutions.The specific research content can be divided into three parts: The first part is "Theoretical Framework Design".This paper first starts from the micro level of element interaction among innovation subjects, and defines the innovation environment of scientific research institutions as the general term of the environmental conditions and situations composed of various elements related to scientific research institutions.Then, based on the research of "science and technology field", the concept of "field" in physics is used to expand the traditional triple helix analysis paradigm. With the triple external environment composed of government, market and society and the internal environment of scientific research institutions as the core spiral, the multiple spiral model is designed to design the innovation environment of scientific research institutions.Finally, based on the micro perspective of knowledge management, the governance process of scientific research institutions' innovation environment is decomposed into four processes: "Elements→Element flow→Local innovation governance environment→Overall innovation governance environment", and the analysis framework of scientific research institutions' innovation environment governance from the perspective of multiple spirals is designed according to this process.The second part is "Case Analysis and Discovery".Based on the designed analytical framework of innovative environmental governance of scientific research institutions, the Grounded theory data processing program is used to conduct multi case Exploratory research on innovative environmental governance practices of six typical cases at home and abroad. Then, according to the results of multi case exploratory research, this paper abstracts the key process elements of innovation environment governance of scientific research institutions, and then constructs the "governance process theory of local spiral to overall spiral of innovation environment of scientific research institutions".The third part is "Conclusions and Suggestions".Combined with the problems exposed in the development process of the innovation environment of scientific research institutions and the theory of the designed governance process, this paper puts forward three countermeasures and suggestions, which are: (1) Strengthen institutional innovation and improve the stability of the external spiral environment; (2) Promote the position of human capital and optimize the internal spiral resource allocation mode; (3) Improve the performance evaluation system, and improve the long-term mechanism of internal and external spiral environment incentive compatibility.These three suggestions provide decision-making basis for promoting the efficient governance of innovation environment of scientific research institutions in China.